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Biogeography and diversity of Collodaria (Radiolaria) in the global ocean

Tristan Biard , Estelle Bigeard , Stéphane Audic , Julie Poulain , Andres Gutierrez-Rodriguez et al.
ISME JOURNAL, 2017, 11 (6), pp.1331-1344. ⟨10.1038/ismej.2017.12⟩
Journal articles hal-03502955v1
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Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems

Luigi Caputi , Quentin Carradec , Damien Eveillard , Amos Kirilovsky , Eric Pelletier et al.
Global Biogeochemical Cycles, 2019, 33 (3), pp.391-419. ⟨10.1029/2018GB006022⟩
Journal articles hal-02999805v1
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Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition

Adriana A. Alberti , Julie Poulain , Stefan Engelen , Karine Labadie , Sarah Romac et al.
Scientific Data , 2017, 4, ⟨10.1038/sdata.2017.93⟩
Journal articles hal-01771844v1
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Structure and function of the global ocean microbiome

Shinichi Sunagawa , Luis Pedro Coelho , Samuel Chaffron , Jens Roat Kultima , Karine Labadie et al.
Science, 2015, 348 (6237), pp.1261359. ⟨10.1126/science.1261359⟩
Journal articles hal-01233742v1
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Eukaryotic plankton diversity in the sunlit ocean

Noan Le Bescot , Ian Probert , Margaux Carmichael , Julie Poulain , Sarah Romac et al.
Science, 2015, 348 (6237), pp.1261605. ⟨10.1126/science.1261605⟩
Journal articles hal-01253979v1
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Rhythmicity of coastal marine picoeukaryotes, bacteria and archaea despite irregular environmental perturbations

Stefan Lambert , Margot Tragin , Jean-Claude Lozano , Jean-François Ghiglione , Daniel Vaulot et al.
ISME Journal, 2019, 13 (2), pp.388-401. ⟨10.1038/s41396-018-0281-z⟩
Journal articles hal-02326251v1
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Green Edge ice camp campaigns: understanding the processes controlling the under-ice Arctic phytoplankton spring bloom

Philippe Massicotte , Rémi Amiraux , Marie-Pier Amyot , Philippe Archambault , Mathieu Ardyna et al.
Earth System Science Data : Papers in open discussion, 2020, 12 (1), pp.151-176. ⟨10.5194/essd-12-151-2020⟩
Journal articles hal-02292721v1

Analysis of the genomic basis of functional diversity in dinoflagellates using a transcriptome-based sequence similarity network.

Arnaud Meng , Erwan Corre , Ian Probert , Andres Gutierrez-Rodriguez , Raffaele Siano et al.
Molecular Ecology, 2018, 27 (10), pp.2365-2380. ⟨10.1111/mec.14579⟩
Journal articles hal-02879300v1

First Ultrastructural and Molecular Phylogenetic Evidence from the Blastogregarines, an Early Branching Lineage of Plesiomorphic Apicomplexa

Timur Simdyanov , Gita Paskerova , Andrea Valigurová , Andrei Diakin , Magdaléna Kováčiková et al.
Protist, 2018, 169 (5), pp.697-726. ⟨10.1016/j.protis.2018.04.006⟩
Journal articles mnhn-02878027v1
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Influence of depth and time on diversity of free-living microbial community in the variably saturated zone of a granitic aquifer

Nolwenn Bougon , Luc Aquilina , Jérôme Molenat , Dominique Marie , Yannick R. Delettre et al.
FEMS Microbiology Ecology, 2012, 80 (1), pp.98-113. ⟨10.1111/j.1574-6941.2011.01273.x⟩
Journal articles hal-00696395v1

Contribution of siliceous Rhizaria in the marine silica and carbon cycle

Aude Leynaert , Natalia Llopis-Monferrer , Paul Tréguer , Fabrice Not
IMBER Future Oceans Conference, Jun 2019, Brest, France
Conference papers hal-02404539v1

Rhizaria: An unexpected role in the carbon biological pump, and in the silica cycle

Aude Leynaert , Natalia Llopis-Monferrer , Miguel Mendez-Sandin , Fabrice Not , Paul Tréguer et al.
SILICAMICS 2 Conference (Biogeochemistry and genomics of silicification and silicifiers), Jun 2018, Victoria, BC, Canada
Conference papers hal-02404533v1

Rhizaria : An unexpected role in the carbon biological pump, and in the silica cycle.

Aude Leynaert , Natalia Llopis-Monferrer , Miguel Mendez-Sandin , Paul Tréguer , Fabrice Not et al.
Ocean Sciences Meeting, Feb 2018, Portland, United States
Conference papers hal-02404514v1
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An aerobic eukaryotic parasite with functional mitochondria that likely lacks a mitochondrial genome

Uwe John , Yameng Lu , Sylke Wohlrab , Marco Groth , Jan Janouškovec et al.
Science Advances , 2019, 5 (4), pp.eaav1110. ⟨10.1126/sciadv.aav1110⟩
Journal articles hal-02372304v1

Viral attachment to biotic and abiotic surfaces in seawater

Yosuke Yamada , Ryan Guillemette , Anne-Claire Baudoux , Nirav Patel , Farooq Azam et al.
Applied and Environmental Microbiology, 2019, ⟨10.1128/AEM.01687-19⟩
Journal articles hal-02378444v1
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A review of the characteristics of the dinoflagellate parasite Ichthyodinium chabelardi and its potential effect on fin fish populations

Frank H Gleason , Maitreyi Nagarkar , Aurélie Chambouvet , Laure Guillou
Marine and Freshwater Research, 2019, 70 (9), pp.1307-1316. ⟨10.1071/MF18207⟩
Journal articles hal-02372310v1

Impact de la température sur les interactions entre la microalgue marine Micromonas et les virus qui l’infectent

David Demory , Laure Arsenieff , Nathalie Simon , Christophe Six , Fabienne Rigaut-Jalabert et al.
VIIIe Colloque de l'Association Francophone d'Ecologie Microbienne,, Oct 2017, Camaret-sur-Mer, France
Conference poster hal-02368611v1
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Protists Within Corals: The Hidden Diversity

Camille Clerissi , Sébastien Brunet , Jeremie Vidal-Dupiol , Mehdi Adjeroud , Pierre Lepage et al.
Frontiers in Microbiology, 2018, 9, pp.2043. ⟨10.3389/fmicb.2018.02043⟩
Journal articles hal-01887637v1
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A global ocean atlas of eukaryotic genes

Quentin Carradec , Eric Pelletier , Corinne da Silva , Adriana A. Alberti , Yoann Seeleuthner et al.
Nature Communications, 2018, 9 (1), pp.373. ⟨10.1038/s41467-017-02342-1⟩
Journal articles cea-01874711v1

Comparative Time-Scale Gene Expression Analysis Highlights the Infection Processes of Two Amoebophrya Strains

Sarah Farhat , Isabelle Florent , Benjamin Noël , Ehsan Kayal , Corinne da Silva et al.
Frontiers in Microbiology, 2018, 9, ⟨10.3389/fmicb.2018.02251⟩
Journal articles hal-02126891v1

Middle Ordovician acritarchs and problematic organic-walled microfossils from the Saq-Hanadir transitional beds in the QSIM-801 well, Saudi Arabia

Alain Le Hérissé , Marco Vecoli , Claudia Guidat , Fabrice Not , Pierre Breuer et al.
Revue de Micropaléontologie, 2017, 60 (3), pp.289 - 318. ⟨10.1016/j.revmic.2017.08.001⟩
Journal articles hal-01919447v1
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The Ocean Gene Atlas: exploring the biogeography of plankton genes online

Emilie Villar , Thomas Vannier , Caroline Vernette , Magali Lescot , Miguelangel Cuenca et al.
Nucleic Acids Research, 2018, 46 (W1), pp.gky376. ⟨10.1093/nar/gky376⟩
Journal articles hal-01803597v1

Patterns and ecological drivers of ocean viral communities

Jennifer Brum , J Cesar Ignacio-Espinoza , Simon Roux , Guilhem Doulcier , Silvia G. Acinas et al.
Science, 2015, 348 ( 6237), pp.1261498. ⟨10.1126/science.1261498⟩
Journal articles hal-01768331v1

The Roscoff Culture Collection (RCC): a collection dedicated to marine picoplankton

D. Vaulot , F. Le Gall , D. Marie , L. Guillou , F. Partensky et al.
Nova Hedwigia, 2004, 79 (1-2), pp.49-70
Journal articles hal-01663376v1
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Comparison of coastal phytoplankton composition estimated from the V4 and V9 regions of 18S rRNA gene with a focus on photosynthetic groups and especially Chlorophyta

Margot Tragin , Adriana Zingone , Daniel Vaulot
Environmental Microbiology, 2017, 20 (2), pp.506-520. ⟨10.1111/1462-2920.13952⟩
Journal articles hal-01628365v1

Mixotrophy everywhere on land and in water: the grand écart hypothesis

Marc-André Selosse , Marie Charpin , Fabrice Not , Punidan D. Jeyasingh
Ecology Letters, 2017, 20 (2), pp.246 - 263. ⟨10.1111/ele.12714⟩
Journal articles hal-01624074v1
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Revision of the Genus Micromonas Manton et Parke (Chlorophyta, Mamiellophyceae), of the Type Species M. pusilla (Butcher) Manton & Parke and of the Species M. commoda van Baren, Bachy and Worden and Description of Two New Species Based on the Genetic and Phenotypic Characterization of Cultured Isolates

Nathalie Simon , Elodie Foulon , Daphné Grulois , Christophe Six , Yves Desdevises et al.
Protist, 2017, 168 (5), pp.612-635. ⟨10.1016/j.protis.2017.09.002⟩
Journal articles hal-01614739v1
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Redescription and phylogenetic analyses of Durchoniella spp. (Ciliophora, Astomatida) associated with the polychaete Cirriformia tentaculata (Montagu, 1808)

Laure Sauvadet , Denis H. Lynn , Erwan Roussel , Sophie Le Panse , Estelle Bigeard et al.
European Journal of Protistology, 2017, 61 (Part A), pp.265-277. ⟨10.1016/j.ejop.2017.06.007⟩
Journal articles hal-01578167v1
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A new view on the morphology and phylogeny of eugregarines suggested by the evidence from the gregarine Ancora sagittata (Leuckart, 1860) Labbé, 1899 (Apicomplexa: Eugregarinida)

Timur G. Simdyanov , Laure Guillou , Andrei Y. Diakin , Kirill V. Mikhailov , Joseph Schrével et al.
PeerJ, 2017, 5, pp.e3354. ⟨10.7717/peerj.3354⟩
Journal articles hal-01547875v1
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Micromonas versus virus: New experimental insights challenge viral impact

Eliana Ruiz , Anne-Claire Baudoux , Nathalie Simon , Ruth-Anne Sandaa , T. Frede Thingstad et al.
Environmental Microbiology, 2017, 49 (1), pp.168-179. ⟨10.1111/1462-2920.13733⟩
Journal articles hal-01511092v1