Search - Université Pierre et Marie Curie Access content directly

Filter your results

16 Results
authFullName_s : Frédéric Mahé

Placing Environmental Next-Generation Sequencing Amplicons from Microbial Eukaryotes into a Phylogenetic Context

Micah Dunthorn , Johannes Otto , Simon A. Berger , Alexandros Stamatakis , Frédéric Mahé , et al.
Molecular Biology and Evolution, 2014, 31 (4), pp.993-1009. ⟨10.1093/molbev/msu055⟩
Journal articles hal-01258215v1
Image document

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy

Laure Guillou , Dipankar Bachar , Stéphane Audic , David Bass , Cédric Berney , et al.
Nucleic Acids Research, 2013, 41 (D1), pp.D597-D604. ⟨10.1093/nar/gks1160⟩
Journal articles hal-01253994v1

Molecular diversity and distribution of marine fungi across 130 European environmental samples

Thomas A. Richards , Guy Leonard , Frédéric Mahé , Javier Del Campo , Sarah Romac , et al.
Proceedings of the Royal Society B: Biological Sciences, 2015, 282 (1819), pp.20152243. ⟨10.1098/rspb.2015.2243⟩
Journal articles hal-01258213v1
Image document

Eukaryotic plankton diversity in the sunlit ocean

Noan Le Bescot , Ian Probert , Margaux Carmichael , Julie Poulain , Sarah Romac , et al.
Science, 2015, 348 (6237), pp.1261605. ⟨10.1126/science.1261605⟩
Journal articles hal-01253979v1
Image document

PFR²: a curated database of planktonic Foraminifera18S ribosomal DNA as a resource for studies of plankton ecology, biogeography, and evolution

Raphaël Morard , Kate F Darling , Frédéric Mahé , Stéphane Audic , Yurika Ujiié , et al.
Molecular Ecology Resources, 2015, 15 (6), pp.1472-1485. ⟨10.1111/1755-0998.12410⟩
Journal articles hal-01149023v2
Image document

UniEuk : Time to Speak a Common Language in Protistology!

Cédric Berney , Andreea Ciuprina , Sara Bender , Juliet Brodie , Virginia Edgcomb , et al.
Journal of Eukaryotic Microbiology, 2017, 64 (3), pp.407-411. ⟨10.1111/jeu.12414⟩
Journal articles hal-01512649v1

Vampires in the oceans: predatory cercozoan amoebae in marine habitats

Cédric Berney , Sarah Romac , Frédéric Mahé , Sébastien Santini , Raffaele Siano , et al.
ISME Journal, 2013, 7 (12), pp.2387-2399. ⟨10.1038/ismej.2013.116⟩
Journal articles hal-01258230v1

Molecular Phylogeny and Morphological Evolution of the Acantharia (Radiolaria)

Johan Decelle , Noritoshi Suzuki , Frédéric Mahé , Colomban de Vargas , Fabrice Not
Protist, 2012, 163 (3), pp.435-450. ⟨10.1016/j.protis.2011.10.002⟩
Journal articles istex hal-01258238v1
Image document

Swarm v2: highly-scalable and high-resolution amplicon clustering

Frédéric Mahé , Torbjørn Rognes , Christopher Quince , Colomban de Vargas , Micah Dunthorn
PeerJ, 2015, 3, pp.e1420. ⟨10.7717/peerj.1420⟩
Journal articles hal-01271077v1
Image document

Patterns of Rare and Abundant Marine Microbial Eukaryotes

Ramiro Logares , Stéphane Audic , David Bass , Lucie Bittner , Christophe Boutte , et al.
Current Biology - CB, 2014, 24 (8), pp.813-821. ⟨10.1016/j.cub.2014.02.050⟩
Journal articles hal-01149637v1

Global patterns of pelagic dinoflagellate diversity across protist size classes unveiled by metabarcoding

Noan Le Bescot , Frédéric Mahé , Stéphane Audic , Céline Dimier , Marie-Jose Garet , et al.
Environmental Microbiology, 2016, 18 (2), pp.609-626. ⟨10.1111/1462-2920.13039⟩
Journal articles istex hal-01305586v1
Image document

Is the distribution of Prochlorococcus and Synechococcus ecotypes in the Mediterranean Sea affected by global warming?

Daniella Mella-Flores , S. Mazard , Florian Humily , Frédéric Partensky , Frédéric Mahé , et al.
Biogeosciences, 2011, 8 (9), pp.2785-2804. ⟨10.5194/bg-8-2785-2011⟩
Journal articles hal-01218507v1
Image document

Intracellular Diversity of the V4 and V9 Regions of the 18S rRNA in Marine Protists (Radiolarians) Assessed by High-Throughput Sequencing

Johan Decelle , Sarah Romac , Eriko Sasaki , Fabrice Not , Frédéric Mahé
PLoS ONE, 2014, 9 (8), pp.e104297. ⟨10.1371/journal.pone.0104297⟩
Journal articles hal-01100668v1
Image document

Diversity, ecology and biogeochemistry of cyst-forming acantharia (radiolaria) in the oceans.

Johan Decelle , Patrick Martin , Katsiaryna Paborstava , David W Pond , Geraint Tarling , et al.
PLoS ONE, 2013, 8 (1), pp.e53598. ⟨10.1371/journal.pone.0053598⟩
Journal articles hal-00817877v1
Image document

Swarm: robust and fast clustering method for amplicon-based studies

Frédéric Mahé , Torbjørn Rognes , Christopher Quince , Colomban de Vargas , Micah Dunthorn
PeerJ, 2014, 2, pp.e593. ⟨10.7717/peerj.593⟩
Journal articles hal-01245140v1
Image document

Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

Ramon Massana , Angélique Gobet , Stéphane Audic , David Bass , Lucie Bittner , et al.
Environmental Microbiology, 2015, 17 (10), pp.4035-4049. ⟨10.1111/1462-2920.12955⟩
Journal articles hal-01191731v1