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labStructName_t : Laboratoire d'océanographie de Villefranche
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Influence of the Phytoplankton Community Structure on the Spring and Annual Primary Production in the Northwestern Mediterranean Sea

Nicolas Mayot , Fabrizio d'Ortenzio , Julia Uitz , Bernard Gentili , Joséphine Ras , et al.
Journal of Geophysical Research. Oceans, 2017, 122 (12), pp.9918-9936. ⟨10.1002/2016JC012668⟩
Journal articles hal-03136999v1

Potential of evolution engineering for enhancing productivity of microalgae

Hubert Bonnefond , Amélie Talec , Eric Pruvost , M O Boutoute , Ghjuvan Micaelu Grimaud , et al.
AlgaEurope 2017 Conference, Dec 2017, Berlin, Germany
Conference papers hal-02368534v1
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Effects of in situ CO 2 enrichment on epibiont settlement on artificial substrata within a Posidonia oceanica meadow

T.E. Cox , V. Díaz-Castañeda , Sophie Martin , S. Alliouane , P. Mahacek , et al.
Journal of Experimental Marine Biology and Ecology, 2017, 497, pp.197-211. ⟨10.1016/j.jembe.2017.10.003⟩
Journal articles hal-01629341v1
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Modeling the impact of high temperatures on microalgal viability and photosynthetic activity

Quentin Béchet , Martin Laviale , Nicolas Arsapin , Hubert Bonnefond , Olivier Bernard
Biotechnology for Biofuels, 2017, 10 (1), pp.136. ⟨10.1186/s13068-017-0823-z⟩
Journal articles hal-01530933v1
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Carbon-13 labelling shows no effect of ocean acidification on carbon transfer in Mediterranean plankton communities

Laure Maugendre , Jean-Pierre Gattuso , A. de Kluijver , K. Soetaert , D. van Oevelen , et al.
Estuarine, Coastal and Shelf Science, 2017, 186 (A), pp.100-111. ⟨10.1016/j.ecss.2015.12.018⟩
Journal articles hal-01252022v1

Insights into the Biodiversity, Behavior, and Bioluminescence of Deep-Sea Organisms Using Molecular and Maritime Technology

Steven Haddock , Lynne Christianson , Warren Francis , Severine Martini , Meghan Powers , et al.
Oceanography, 2017, 30 (4), pp.38-47. ⟨10.5670/oceanog.2017.422⟩
Journal articles hal-02071200v1
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Nitrogen and Phosphorus Budgets in the Northwestern Mediterranean Deep Convection Region

Fayçal Kessouri , Caroline Ulses , Claude Estournel , Patrick Marsaleix , Tatiana Séverin , et al.
Journal of Geophysical Research. Oceans, 2017, 122 (12), pp.9429-9454. ⟨10.1002/2016JC012665⟩
Journal articles hal-02347234v1
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Mathematical modelling of microbes: metabolism, gene expression and growth

Hidde de Jong , Stefano Casagranda , Nils Giordano , Eugenio Cinquemani , Delphine Ropers , et al.
Journal of the Royal Society Interface, 2017, 14 (136), pp.1-14. ⟨10.1098/rsif.2017.0502⟩
Journal articles hal-01666954v1
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Analyse des variations spatio-temporelles du zooplancton gélatineux et son effet sur les flux de matières à l'aide d'une approche combinant expérimentation et écologie numérique

Simon Ramondenc
Ecologie, Environnement. Université Pierre et Marie Curie - Paris VI, 2017. Français. ⟨NNT : 2017PA066528⟩
Theses tel-02080731v1
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Estimating virus effective population size and selection without neutral markers

Elsa Rousseau , Benoît Moury , Ludovic Mailleret , Rachid Senoussi , Alain Palloix , et al.
PLoS Pathogens, 2017, 13 (11), pp.e1006702. ⟨10.1371/journal.ppat.1006702⟩
Journal articles hal-01658535v2

A multi-seasonal model of plant-nematode interactions and its use to identify durable plant resistance deployment strategies

Samuel Nilusmas , Mathilde Mercat , Thomas Perrot , Suzanne Touzeau , Vincent Calcagno , et al.
Acta Horticulturae, 2017, 1182, pp.211 - 218. ⟨10.17660/ActaHortic.2017.1182.25⟩
Journal articles hal-01661995v1
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Cell division, endoreduplication and expansion processes: setting the cell and organ control into an integrated model of tomato fruit development

Valentina Baldazzi , Michel Génard , Nadia Bertin
Acta Horticulturae, 2017, 1182, pp.257 - 264. ⟨10.17660/ActaHortic.2017.1182.31⟩
Journal articles hal-01661920v1

Impact de la température sur les interactions entre la microalgue marine Micromonas et les virus qui l’infectent

David Demory , Laure Arsenieff , Nathalie Simon , Christophe Six , Fabienne Rigaut-Jalabert , et al.
VIIIe Colloque de l'Association Francophone d'Ecologie Microbienne,, Oct 2017, Camaret-sur-Mer, France
Conference poster hal-02368611v1

Épidémiologie mathématique : applications en élevage et en agriculture

Suzanne Touzeau
MADEV17 - Mathématiques Appliquées à des questions de DEVeloppement, Académie des Sciences, France; Académie Hassan II des Sciences et Techniques, Maroc, Oct 2017, Rabat, Maroc
Conference papers hal-01651426v1
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The influence of macroalgae on the proliferation and regulation of the benthic dinoflagellate Ostreopsis cf. ovata blooms

Daniela Catania
Agricultural sciences. COMUE Université Côte d'Azur (2015 - 2019), 2017. English. ⟨NNT : 2017AZUR4083⟩
Theses tel-01682210v1
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Regionalisation of the Mediterranean basin, a MERMEX synthesis

Sakina-Dorothée Ayata , Jean-Olivier Irisson , Anais Aubert , L. Berline , Jean-Claude Dutay , et al.
Progress in Oceanography, 2017, 163, pp.7 - 20. ⟨10.1016/j.pocean.2017.09.016⟩
Journal articles hal-01629104v1
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Proposition de campagne à la mer, Flotte Océanographique Française, Appel d'offre 2018 : Multi-disciplinary investigation of fluid venting from gas hydrate system in the Nile deep-sea fan (SEAGAL)

Sebastien Migeon , Marie Revel-Rolland , Alexandre Dano , Gueorgui Ratzov , Davide Oregioni , et al.
2017
Preprints, Working Papers, ... hal-02156791v1

How to prevent viremia rebound? Evidence from a PRRSv data-supported model of the immune response

Natacha Go , Suzanne Touzeau , Andrea Doeschl-Wilson , Catherine Belloc
IDDconf 2017 - Conference of Infectious Disease Dynamics, Sep 2017, Ambleside, Cumbria, United Kingdom
Conference papers hal-01739901v1

Water intrusions and particle signatures in the Black Sea: a Biogeochemical-Argo float investigation

Emil Vassilev Stanev , Sebastian Grayek , Hervé Claustre , Chaterine Schmechtig , Antoine Poteau
Ocean Dynamics, 2017, 67 (9), pp.1119-1136. ⟨10.1007/s10236-017-1077-9⟩
Journal articles hal-02167959v1

New insights into global biogeography, population structure and natural selection from the genome of the epipelagic copepod Oithona

Mohammed-Amin Madoui , Julie Poulain , Kevin Sugier , Marc Wessner , Benjamin Noel , et al.
Molecular Ecology, 2017, 26 (17), pp.4467 - 4482. ⟨10.1111/mec.14214⟩
Journal articles hal-01621969v1
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Modeling the temperature effect on the specific growth rate of phytoplankton: a review

Ghjuvan Micaelu Grimaud , Francis Mairet , Antoine Sciandra , Olivier Bernard
Reviews in Environmental Science and Bio/technology, 2017, ⟨10.1007/s11157-017-9443-0⟩
Journal articles hal-01576871v1
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Continuous selection pressure to improve temperature acclimation of Tisochrysis lutea

Hubert Bonnefond , Ghjuvan Micaelu Grimaud , Judith Rumin , Gaël Bougaran , Amélie Talec , et al.
Journal articles hal-01576865v1
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A time-space model for the growth of microalgae biofilms for biofuel production

Bastien Polizzi , O. Bernard , Magali Ribot
Journal of Theoretical Biology, 2017, ⟨10.1016/j.jtbi.2017.08.017⟩
Journal articles hal-01408045v1
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Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition

Adriana A. Alberti , Julie Poulain , Stefan Engelen , Karine Labadie , Sarah Romac , et al.
Scientific Data , 2017, 4, ⟨10.1038/sdata.2017.93⟩
Journal articles hal-01771844v1
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Trophic pathways of phytoplankton size classes through the zooplankton food web over the spring transition period in the north-west Mediterranean Sea

Brian Hunt , Francois Carlotti , Katty Donoso , Marc Pagano , Fabrizio d'Ortenzio , et al.
Journal of Geophysical Research. Oceans, 2017, 122 (8), pp.6309 - 6324. ⟨10.1002/2016JC012658⟩
Journal articles hal-01621954v1
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A submesoscale coherent vortex in the Ligurian Sea: From dynamical barriers to biological implications

Anthony Bosse , Pierre Testor , Nicolas Mayot , Louis Prieur , Fabrizio d'Ortenzio , et al.
Journal of Geophysical Research. Oceans, 2017, 122 (8), pp.6196 - 6217. ⟨10.1002/2016JC012634⟩
Journal articles hal-01621729v1
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Dynamics of particulate organic matter composition in coastal systems: a spatio-temporal study at multi-systems scale

Camilla Liénart , Nicolas Savoye , Yann Bozec , Elsa Breton , Pascal Conan , et al.
Progress in Oceanography, 2017, 156, pp.221-239. ⟨10.1016/j.pocean.2017.03.001⟩
Journal articles hal-01510337v1

Significant Change in Marine Plankton Structure and Carbon Production After the Addition of River Water in a Mesocosm Experiment

E. Fouilland , A. Trottet , C. Alves-De-Souza , D. Bonnet , T. Bouvier , et al.
Microbial ecology, 2017, 74 (2), pp.289 - 301. ⟨10.1007/s00248-017-0962-6⟩
Journal articles hal-01887206v1
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Threats to large brown algal forests in temperate seas: the overlooked role of native herbivorous fish

Fabrizio Gianni , Fabrizio Bartolini , Alexis Pey , Mathieu Laurent , Gustavo M. Martins , et al.
Scientific Reports, 2017, 7, pp.6012. ⟨10.1038/s41598-017-06394-7⟩
Journal articles hal-01581790v1
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Particulate concentration and seasonal dynamics in the mesopelagic ocean based on the backscattering coefficient measured with Biogeochemical-Argo floats

Antoine Poteau , Emmanuel Boss , Hervé Claustre
Geophysical Research Letters, 2017, 44 (13), pp.6933 - 6939. ⟨10.1002/2017GL073949⟩
Journal articles hal-01924391v1
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A comprehensive reduced model of the mammalian cell cycle

Sofia Almeida , Madalena Chaves , Franck Delaunay , Celine Feillet
IFAC World Congress 2017, Jul 2017, Toulouse, France. ⟨10.1016/j.ifacol.2017.08.2204⟩
Conference papers hal-01568507v1
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Optimal resource allocation for biotrophic plant pathogens

Ivan Yegorov , Frédéric Grognard , Ludovic Mailleret , Fabien Halkett
IFAC 2017 - 20th World Congress of the International Federation of Automatic Control, International Federation of Automatic Control (IFAC). AUT., Jul 2017, Toulouse, France. pp.1-6, ⟨10.1016/j.ifacol.2017.08.328⟩
Conference papers hal-01572090v1
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Modélisation de stratégies d'introduction de populations, effets Allee et stochasticité

Nicolas Bajeux
Autre. Université Côte d'Azur, 2017. Français. ⟨NNT : 2017AZUR4056⟩
Theses tel-01865809v1
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Atmospheric Deposition Effects on Plankton Communities in the Eastern Mediterranean: A Mesocosm Experimental Approach

T. Tsagaraki , Barak Herut , Eyal Rahav , Ilana Berman-Frank , A. Tsiola , et al.
Frontiers in Marine Science, 2017, 4, pp.1-17. ⟨10.3389/fmars.2017.00210⟩
Journal articles hal-01555708v1

Plankton assemblage estimated with BGC-Argo floats in the Southern Ocean

Mathieu Rembauville , Nathan Briggs , Mathieu Ardyna , Julia Uitz , Hervé Claustre , et al.
6th Euro-Argo users meeting, Jul 2017, Paris, Unknown Region
Conference papers hal-03946334v1
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Principal Process Analysis and reduction of biological models with order of magnitude

Stefano Casagranda , Jean-Luc Gouzé
IFAC World Congress, International Federation of Automatic Control (IFAC). AUT., Jul 2017, Toulouse, France. 15968 p., ⟨10.1016/j.ifacol.2017.08.2241⟩
Conference papers hal-01529448v1
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Optimal resource allocation for bacterial growth with degradation

Ivan Yegorov , Francis Mairet , Jean-Luc Gouzé
IFAC World Congress, International Federation of Automatic Control (IFAC). AUT., Jul 2017, Toulouse, France. 15968 p., ⟨10.1016/j.ifacol.2017.08.1593⟩
Conference papers hal-01524917v1
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Maximizing microalgae productivity by shading outdoor cultures

Carlos Martínez , Olivier Bernard , Francis Mairet
50 (1), Elsevier, pp.8734 - 8739, 2017, IFAC papers online, ⟨10.1016/j.ifacol.2017.08.1725⟩
Proceedings hal-01666463v1

Exploiting meteorological forecasts for the optimal operation of algal ponds

Riccardo De-Luca , Fabrizio Bezzo , Quentin Béchet , Olivier Bernard
Journal of Process Control, 2017, 55, pp.55 - 65. ⟨10.1016/j.jprocont.2017.03.010⟩
Journal articles hal-01666404v1

Quantitative trait loci in pepper control the effective population size of two RNA viruses at inoculation

Lucie Tamisier , Elsa Rousseau , Sebastien Barraillé , Ghislaine Nemouchi , Marion Szadkowski , et al.
Journal of General Virology, 2017, 98 (7), pp.1923 - 1931. ⟨10.1099/jgv.0.000835⟩
Journal articles hal-01571391v1
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Modeling, analysis and reduction of biological systems

Stefano Casagranda
Other. Université Côte d'Azur, 2017. English. ⟨NNT : 2017AZUR4049⟩
Theses tel-02169197v1

Evolution engineering for enhancing photosynthetic efficiency of high density cultures of Tisochrysis lutea

Hubert Bonnefond , Yann Lie , Eric Pruvost , Amélie Talec , Olivier Bernard , et al.
6th congress of the International Society for Applied Phycology, Jun 2017, Nantes, France
Conference papers hal-02370032v1

Impact of high temperatures on microalgal viability and photosynthetic activity: consequence for mass cultivation

Quentin Béchet , Martin Laviale , Nicolas Arsapin , Hubert Bonnefond , Olivier Bernard
6th congress of the International Society for Applied Phycology (ISAP), Jun 2017, Nantes, France
Conference papers hal-03231822v1

Neutralising antibodies prevent PRRS viremia rebound: evidence from a data-supported model of immune response

Natacha Go , Suzanne Touzeau , Catherine Belloc , Andrea Doeschl-Wilson
ModAH 2017 - Modelling in Animal Health conference, INRA, Jun 2017, Nantes, France. 69 p
Conference papers hal-01577647v1
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Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes

Caroline Baroukh , Violette Turon , Olivier Bernard
PLoS Computational Biology, 2017, 13 (6), pp.e1005590. ⟨10.1371/journal.pcbi.1005590⟩
Journal articles hal-01576858v1
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Shelled pteropods in peril: Assessing vulnerability in a high CO 2 ocean

Clara Manno , Nina Bednaršek , Geraint A Tarling , Vicky L Peck , Steeve Comeau , et al.
Earth-Science Reviews, 2017, 169, pp.132-145. ⟨10.1016/j.earscirev.2017.04.005⟩
Journal articles insu-03043084v1
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Role for Atlantic inflows and sea ice loss on shifting phytoplankton blooms in the Barents Sea

Laurent Oziel , Griet Neukermans , Mathieu Ardyna , Christiane Lancelot , Jean-Louis Tison , et al.
Journal of Geophysical Research. Oceans, 2017, 122 (6), pp.5121 - 5139. ⟨10.1002/2016JC012582⟩
Journal articles hal-01644551v1
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Delineating environmental control of phytoplankton biomass and phenology in the Southern Ocean

Mathieu Ardyna , Hervé Claustre , Jean-Baptiste Sallée , Francesco d'Ovidio , Bernard Gentili , et al.
Geophysical Research Letters, 2017, 44 (10), pp.5016 - 5024. ⟨10.1002/2016GL072428⟩
Journal articles hal-01629465v1
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Ecophysiologie du zooplancton: de l’étude des processus à petite échelle jusqu’aux implications à grande échelle

Fabien Lombard
Ecologie, Environnement. Sorbone Université, 2017
Habilitation à diriger des recherches tel-04021176v1
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Bio-optical anomalies in the world's oceans: An investigation on the diffuse attenuation coefficients for downward irradiance derived from Biogeochemical Argo float measurements

Emanuele Organelli , Hervé Claustre , Annick Bricaud , Marie Barbieux , Julia Uitz , et al.
Journal of Geophysical Research. Oceans, 2017, 122 (5), pp.3543-3564. ⟨10.1002/2016JC012629⟩
Journal articles hal-03137011v1

Consistent patterns of spatial variability between NE Atlantic and Mediterranean rocky shores

Martina Dal Bello , Jean-Charles Leclerc , Lisandro Benedetti-Cecchi , Giuseppe Andrea de Lucia , Christos Arvanitidis , et al.
Journal of the Marine Biological Association of the UK, 2017, 97 (3), pp.539-547. ⟨10.1017/S0025315416001491⟩
Journal articles hal-02470376v1

Essence of the patterns of cover and richness of intertidal hard bottom communities: a pan-European study

Jonne Kotta , Helen Orav-Kotta , Holger Jänes , Herman Hummel , Christos Arvanitidis , et al.
Journal of the Marine Biological Association of the UK, 2017, 97 (3), pp.525-538. ⟨10.1017/S0025315416001351⟩
Journal articles hal-02470386v1

The role of physical variables in biodiversity patterns of intertidal macroalgae along European coasts

Araceli Puente , Xabier Guinda , Jose Juanes , Elvira Ramos , Beatriz Echavarri-Erasun , et al.
Journal of the Marine Biological Association of the UK, 2017, 97 (3), pp.549-560. ⟨10.1017/S0025315416001673⟩
Journal articles hal-02470393v1
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Glider and satellite monitoring of the variability of the suspended particle distribution and size in the Rhône ROFI

Gael Many , François Bourrin , Xavier Durrieu de Madron , Anouck Ody , David Doxaran , et al.
Progress in Oceanography, 2017, 163, pp.123 - 135. ⟨10.1016/j.pocean.2017.05.006⟩
Journal articles hal-01622041v1

Geographic patterns of biodiversity in European coastal marine benthos

Herman Hummel , Pim van Avesaath , Sander Wijnhoven , Loran Kleine-Schaars , Steven Degraer , et al.
Journal of the Marine Biological Association of the UK, 2017, 97 (3), pp.507-523. ⟨10.1017/S0025315416001119⟩
Journal articles hal-02470399v1

Demographic modelling approach for assessment of environmental conditions which control the population of the invasive Ctenophore Mnemiopsis leidyi in the Mediterranean Seas

Tamara Shiganova , Paul Nival , Francois Carlotti , Elena Alekseenko
EGU General Assembly 2017, Apr 2017, Wien, Austria
Conference papers hal-03005790v1

Nitrogen and phosphorus seasonal dynamics and annual budget in the Northwestern Mediterranean deep convection region inferred from a 3D physical/biogeochemical coupled model

Fayçal Kessouri , Caroline Ulses , Claude Estournel , Patrick Marsaleix , Mireille Pujo-Pay , et al.
19th EGU General Assembly, EGU, Apr 2017, Vienne, Austria. pp.16163
Conference papers hal-01644790v1

Using tintinnid ciliates as a model group to uncover biodiversity patterns in marine microbes

John R Dolan
Microbiology Society Annual Conference, Apr 2017, Edinburgh & Online, United Kingdom
Conference papers hal-03943694v1

Selective bioreactor for microalgae

Olivier Bernard , Antoine Sciandra , Francis Mairet , Hubert Bonnefond , Eric Pruvost
France, Patent n° : WO2017174907A1. 2017
Patents hal-01671566v1
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Benthic Dinoflagellate Integrator (BEDI): A new method for the quantification of Benthic Harmful Algal Blooms

Luisa Mangialajo , Anna Fricke , Gala Perez-Gutierrez , Daniela Catania , Cécile Jauzein , et al.
Harmful Algae, 2017, 64, pp.1 - 10. ⟨10.1016/j.hal.2017.03.002⟩
Journal articles hal-01501468v1

A multi-seasonal model of plant-nematode interactions and its use for durable plant resistance deployment strategies

Samuel Nilusmas , Mathilde Mercat , Thomas Perrot , Suzanne Touzeau , Vincent Calcagno , et al.
EASYs 2017 - Ecology & Agriculture Summit for Young scientists, EAS., Mar 2017, Chizé, France
Conference papers hal-01606132v1

Modeling cell death dynamics at the receptor level

Luis Pereira , Mickael Meyer , Paul Hofman , Jean-Luc Gouzé , Madalena Chaves , et al.
CompSysBio, Advanced Lecture Course on Computational Systems Biology, Mar 2017, Aussois, France
Conference papers hal-01568506v1
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No detectable effect of ocean acidification on plankton metabolism in the NW oligotrophic Mediterranean Sea: results from two mesocosm studies

Laure Maugendre , Jean-Pierre Gattuso ,