Search - Université Pierre et Marie Curie Access content directly

Filter your results

79 Results
Document type : Journal articles
labStructName_t : Institute of Marine Sciences | Institut de Ciències del Mar [Barcelona]

Spatial variability of marine bacterial and archaeal communities along the particulate matter continuum.

Eva Ortega-Retuerta , Mireia Mestre , Isabel Ferrera , Encarna Borrull , Eva Ortega-Retuerta et al.
Molecular Ecology, 2017
Journal articles hal-04003665v1

Integrating chytrid fungal parasites into plankton ecology: research gaps and needs

Thijs Frenken , Elisabet Alacid , Stella A. Berger , Elizabeth C. Bourne , Mélanie Gerphagnon et al.
Environmental Microbiology, 2017, 19 (10), pp.3802 - 3822. ⟨10.1111/1462-2920.13827⟩
Journal articles hal-01624039v1
Image document

Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition

Adriana A. Alberti , Julie Poulain , Stefan Engelen , Karine Labadie , Sarah Romac et al.
Scientific Data , 2017, 4, ⟨10.1038/sdata.2017.93⟩
Journal articles hal-01771844v1
Image document

Exploring Microdiversity in Novel Kordia sp (Bacteroidetes) with Proteorhodopsin from the Tropical Indian Ocean via Single Amplified Genomes

Marta Royo-Llonch , Isabel Ferrera , Francisco M. Cornejo-Castillo , Pablo Sánchez , Guillem Salazar et al.
Frontiers in Microbiology, 2017, 8, ⟨10.3389/fmicb.2017.01317⟩
Journal articles hal-03502952v1
Image document

When riverine dissolved organic matter (DOM) meets labile DOM in coastal waters: changes in bacterial community activity and composition

Marine Blanchet , Olivier Pringault , Christos Panagiotopoulos , Dominique Lefèvre , Bruno Charrìère et al.
Aquatic Sciences - Research Across Boundaries, 2017, 79 (1), pp.27-43. ⟨10.1007/s00027-016-0477-0⟩
Journal articles hal-01285402v1
Image document

Dimethylated sulfur compounds in symbiotic protists: A potentially significant source for marine DMS(P)

Andres Gutierrez-Rodriguez , Loic Pillet , Tristan Biard , Ward Said-Ahmad , Alon Amrani et al.
Limnology and Oceanography, 2017, 62 (3 ), pp.1139-1154 ⟨10.1002/lno.10491⟩
Journal articles hal-01480231v1
Image document

Accessing the genomic information of unculturable oceanic picoeukaryotes by combining multiple single cells

Jean-François Mangot , Ramiro Logares , Pablo Sánchez , Fran Latorre , Yoann 6 Seeleuthner et al.
Scientific Reports, 2017, 7, pp.41498. ⟨10.1038/srep41498⟩
Journal articles hal-01466618v1

Limited Genetic Connectivity between Gorgonian Morphotypes along a Depth Gradient

Federica Costantini , Andrea Gori , Pablo Lopez-González , Lorenzo Bramanti , Sergio Rossi et al.
PLoS ONE, 2016, 11 (8), pp.e0160678. ⟨10.1371/journal.pone.0160678⟩
Journal articles hal-01369559v1

Macroepibenthic communities at the tip of the Antarctic Peninsula, an ecological survey at different spatial scales.

Julian Gutt , M. C. Alvaro , A. Barco , A. Böhmer , A. Bracher et al.
Polar Biology, 2016, 39 (5), pp.829-849. ⟨10.1007/s00300-015-1797-6⟩
Journal articles hal-01310185v1
Image document

Global distribution and vertical patterns of a prymnesiophyte–cyanobacteria obligate symbiosis

Ana M Cabello , Francisco M Cornejo-Castillo , Nicolas Raho , Dolors Blasco , Montserrat Vidal et al.
ISME Journal, 2016, 10 (3), pp.693-706. ⟨10.1038/ismej.2015.147⟩
Journal articles hal-01289124v1
Image document

Plankton networks driving carbon export in the oligotrophic ocean

Lionel Guidi , Samuel Chaffron , Lucie Bittner , Damien Eveillard , Abdelhalim Larhlimi et al.
Nature, 2016, 532, pp.465-470. ⟨10.1038/nature16942⟩
Journal articles hal-01275276v1
Image document

Impacts of ocean acidification in a warming Mediterranean Sea: An overview

Thomas Lacoue-Labarthe , Paulo A.L.D. Nunes , Patrizia Ziveri , Mine Cinar , Frédéric Gazeau et al.
Regional Studies in Marine Science, 2016, ⟨10.1016/j.rsma.2015.12.005⟩
Journal articles hal-01253944v1
Image document

Environmental sequencing provides reasonable estimates of the relative abundance of specific picoeukaryotes

Caterina R. Giner , Irene Forn , Sarah Romac , Ramiro Logares , Colomban de Vargas et al.
Applied and Environmental Microbiology, 2016, 82 (15), pp.4757-4766. ⟨10.1128/AEM.00560-16⟩
Journal articles hal-01332059v1
Image document

Defining Planktonic Protist Functional Groups on Mechanisms for Energy and Nutrient Acquisition: Incorporation of Diverse Mixotrophic Strategies

Aditee Mitra , Kevin J. Flynn , Urban Tillmann , John A. Raven , David Caron et al.
Protist, 2016, 167 (2), pp.106-120. ⟨10.1016/j.protis.2016.01.003⟩
Journal articles hal-01285634v1
Image document

Benthic protists: the under-charted majority

Dominik Forster , Micah Dunthorn , Fréderic Mahé , John R. Dolan , Stéphane Audic et al.
FEMS Microbiology Ecology, 2016, 92 (8), pp.fiw120. ⟨10.1093/femsec/fiw120⟩
Journal articles hal-01383722v1
Image document

Reply to comment: Prey perception in feeding-current feeding copepods

Thomas Kiørboe , Rodrigo J. Gonçalves , Damien Couespel , Hans van Someren Gréve , Enric Saiz et al.
Limnology and Oceanography Bulletin, 2016, 61 (4), pp.1169 - 1171. ⟨10.1002/lno.10293⟩
Journal articles hal-01497591v1
Image document

Role of zooplankton dynamics for Southern Ocean phytoplankton biomass and global biogeochemical cycles

Corinne Le Quéré , Erik T. Buitenhuis , Róisín Moriarty , Séverine Alvain , Olivier Aumont et al.
Biogeosciences, 2016, 13 (14), pp.4111 - 4133. ⟨10.5194/bg-13-4111-2016⟩
Journal articles hal-01504558v1
Image document

Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton

Francisco M. Cornejo-Castillo , Ana M. Cabello , Guillem Salazar , Patricia Sánchez-Baracaldo , Gipsi Lima-Mendez et al.
Nature Communications, 2016, 7, pp.11071. ⟨10.1038/ncomms11071⟩
Journal articles hal-01295207v1
Image document

Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses

Simon Roux , Jennifer R. Brum , Bas E. Dutilh , Shinichi Sunagawa , Melissa B. Duhaime et al.
Nature, 2016, 537 (7622), pp.689-693. ⟨10.1038/nature19366⟩
Journal articles hal-01376822v1
Image document

Delineating ecologically significant taxonomic units from global patterns of marine picocyanobacteria

Gregory K. Farrant , Hugo Doré , Francisco M. Cornejo-Castillo , Frédéric Partensky , Morgane Ratin et al.
Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (24), pp.E3365-E3374. ⟨10.1073/pnas.1524865113⟩
Journal articles hal-01331214v1
Image document

Water management practices exacerbate nitrogen retention in Mediterranean catchments

Estela Romero , Josette Garnier , Gilles Billen , Franz Peters , Luis Lassaletta et al.
Science of the Total Environment, 2016, 573, pp.420-432. ⟨10.1016/j.scitotenv.2016.08.007⟩
Journal articles hal-01366666v1
Image document

Deep sequencing of amplified Prasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes

Camille Clerissi , Yves Desdevises , Sarah Romac , Stéphane Audic , Colomban de Vargas et al.
Environmental Microbiology Reports, 2015, 7 (6), pp.979-989. ⟨10.1111/1758-2229.12345⟩
Journal articles hal-01246259v1

Molecular diversity and distribution of marine fungi across 130 European environmental samples

Thomas A. Richards , Guy Leonard , Frédéric Mahé , Javier Del Campo , Sarah Romac et al.
Proceedings of the Royal Society B: Biological Sciences, 2015, 282 (1819), pp.20152243. ⟨10.1098/rspb.2015.2243⟩
Journal articles hal-01258213v1
Image document

Changes in bacterial community metabolism and composition during the degradation of dissolved organic matter from the jellyfish Aurelia aurita in a Mediterranean coastal lagoon

Marine Blanchet , Olivier Pringault , Marc Bouvy , Philippe Catala , Louise Oriol et al.
Environmental Science and Pollution Research, 2015, 22 (18), pp.13638-13653. ⟨10.1007/s11356-014-3848-x⟩
Journal articles hal-01103187v1

Diversity and distribution of unicellular opisthokonts along the European coast analysed using high-throughput sequencing

Javier Del Campo , Diego Mallo , Ramon Massana , Colomban de Vargas , Thomas A. Richards et al.
Environmental Microbiology, 2015, 17 (9), pp.3195-3207. ⟨10.1111/1462-2920.12759⟩
Journal articles hal-01258208v1
Image document

A MSFD complementary approach for the assessment of pressures, knowledge and data gaps in Southern European Seas: The PERSEUS experience

A. Crise , H. Kaberi , J. Ruiz , A. Zatsepin , E. Arashkevich et al.
Marine Pollution Bulletin, 2015, 95 (1), pp.28-39. ⟨10.1016/j.marpolbul.2015.03.024⟩
Journal articles hal-01169407v1

Environmental characteristics of Agulhas rings affect interocean plankton transport

Emilie Villar , Gregory Farrant , Michael Follows , Laurence Garczarek , Sabrina Speich et al.
Science, 2015, 348 (6237), pp.1261447 - 1261447. ⟨10.1126/science.1261447⟩
Journal articles hal-01893637v1

Patterns and ecological drivers of ocean viral communities

Jennifer Brum , J Cesar Ignacio-Espinoza , Simon Roux , Guilhem Doulcier , Silvia G. Acinas et al.
Science, 2015, 348 ( 6237), pp.1261498. ⟨10.1126/science.1261498⟩
Journal articles hal-01768331v1

First EURONEAR NEA discoveries from La Palma using the INT★

O. Vaduvescu , L. Hudin , V. Tudor , F. Char , T. Mocnik et al.
Monthly Notices of the Royal Astronomical Society, 2015, 449 (2), pp.1614-1624. ⟨10.1093/mnras/stv266⟩
Journal articles hal-02471021v1
Image document

Structure and function of the global ocean microbiome

Shinichi Sunagawa , Luis Pedro Coelho , Samuel Chaffron , Jens Roat Kultima , Karine Labadie et al.
Science, 2015, 348 (6237), pp.1261359. ⟨10.1126/science.1261359⟩
Journal articles hal-01233742v1
Image document

Sea Surface Salinity Observations with Lagrangian Drifters in the Tropical North Atlantic During SPURS: Circulation, Fluxes, and Comparisons with Remotely Sensed Salinity from Aquarius

Luca R. Centurioni , Verena Hormann , Yi Chao , Gilles Reverdin , Jordi Font et al.
Oceanography, 2015, 28 (1), pp.96-105. ⟨10.5670/oceanog.2015.08⟩
Journal articles hal-01274715v1

Surface Salinity in the North Atlantic Subtropical Gyre During the STRASSE/SPURS Summer 2012 Cruise

Gilles Reverdin , Simon Morisset , Louis Marié , Denis Bourras , Graigory Sutherland et al.
Limnology and Oceanography, 2015, 28 (1), pp.114-123. ⟨10.5670/oceanog.2015.09⟩
Journal articles hal-01233669v1
Image document

Characteristics of colored dissolved organic matter (CDOM) in the Western Arctic Ocean: relationships with microbial activities

Atsushi Matsuoka , Eva Ortega-Retuerta , Annick Bricaud , Kevin R Arrigo , Marcel Babin et al.
Deep Sea Research Part II: Topical Studies in Oceanography, 2015, 118 (Part A), pp.44-52. ⟨10.1016/j.dsr2.2015.02.012⟩
Journal articles hal-01120307v1
Image document

Quantification of larval traits driving connectivity: the case of Corallium rubrum (L. 1758)

A. Martínez-Quintana , L. Bramanti , N. Viladrich , S. Rossi , Katell Guizien et al.
Marine Biology, 2015, 162 (2), pp.309-318. ⟨10.1007/s00227-014-2599-z⟩
Journal articles hal-02955364v1
Image document

Eukaryotic plankton diversity in the sunlit ocean

Noan Le Bescot , Ian Probert , Margaux Carmichael , Julie Poulain , Sarah Romac et al.
Science, 2015, 348 (6237), pp.1261605. ⟨10.1126/science.1261605⟩
Journal articles hal-01253979v1
Image document

Open science resources for the discovery and analysis of Tara Oceans data

Stéphane Pesant , Fabrice Not , Marc Picheral , Stefanie Kandels-Lewis , Noan Le Bescot et al.
Scientific Data , 2015, 2, pp.150023. ⟨10.1038/sdata.2015.23⟩
Journal articles hal-01253984v1
Image document

The ocean sampling day consortium

Anna Kopf , Mesude Bicak , Renzo Kottmann , Julia Schnetzer , Ivaylo Kostadinov et al.
GigaScience, 2015, 4 (1), pp.27. ⟨10.1186/s13742-015-0066-5⟩
Journal articles hal-01174095v1

Determinants of community structure in the global plankton interactome

Gipsi Lima-Mendez , Karoline Faust , Nicolas Henry , Johan Decelle , Sébastien Colin et al.
Science, 2015, 348 (6237), pp.1262073. ⟨10.1126/science.1262073⟩
Journal articles hal-01234200v1
Image document

Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

Ramon Massana , Angélique Gobet , Stéphane Audic , David Bass , Lucie Bittner et al.
Environmental Microbiology, 2015, 17 (10), pp.4035-4049. ⟨10.1111/1462-2920.12955⟩
Journal articles hal-01191731v1
Image document

Glider monitoring of shelf suspended particle dynamics and transport during storm and flooding conditions

François Bourrin , Gaël Many , Xavier Durrieu de Madron , Jacobo Martín , Pere Puig et al.
Continental Shelf Research, 2015, 109, pp.135-149. ⟨10.1016/j.csr.2015.08.031⟩
Journal articles hal-01220695v1
Image document

Use of satellite observations for operational oceanography: recent achievements and future prospects

P. -Y. Le Traon , D. Antoine , A. Bentamy , H. Bonekamp , L. A. Breivik et al.
JOURNAL OF OPERATIONAL OCEANOGRAPHY, 2015, 8 (1, SI), pp.S12-S27. ⟨10.1080/1755876X.2015.1022050⟩
Journal articles hal-03502752v1
Image document

Potential impacts of black carbon on the marine microbial community

Andrea Malits , Raffaela Cattaneo , Eva Sintes , Josep M. Gasol , Gerhard J. Herndl et al.
Aquatic Microbial Ecology, 2015, 75 (1), pp.27-42. ⟨10.3354/ame01742⟩
Journal articles hal-03502745v1
Image document

The significance of the episodic nature of atmospheric deposition to Low Nutrient Low Chlorophyll regions

C. Guieu , O. Aumont , A. Paytan , L. Bopp , C.S. Law et al.
Global Biogeochemical Cycles, 2014, pp.1179-1198. ⟨10.1002/2014GB004852⟩
Journal articles hal-01110987v1

Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities

Ramiro Logares , Shinichi Sunagawa , Guillem Salazar , Francisco M. Cornejo-Castillo , Isabel Ferrera et al.
Environmental Microbiology, 2014, 16 (9, SI), pp.2659-2671. ⟨10.1111/1462-2920.12250⟩
Journal articles istex hal-01258219v1
Image document

Analyzing the 2010-2011 La Niña signature in the tropical Pacific sea surface salinity using in situ data, SMOS observations, and a numerical simulation

Audrey Hasson , Thierry Delcroix , Jacqueline Boutin , Raphaël Dussin , Joaquim Ballabrera-Poy et al.
Journal of Geophysical Research. Oceans, 2014, 119 (6), pp.3855-3867. ⟨10.1002/2013JC009388⟩
Journal articles hal-01233655v1
Image document

Patterns of Rare and Abundant Marine Microbial Eukaryotes

Ramiro Logares , Stéphane Audic , David Bass , Lucie Bittner , Christophe Boutte et al.
Current Biology - CB, 2014, 24 (8), pp.813-821. ⟨10.1016/j.cub.2014.02.050⟩
Journal articles hal-01149637v1
Image document

Validation of Salinity Data from Surface Drifters

Gilles Reverdin , Simon Morisset , Jacqueline Boutin , Nicolas Martin , M. Sena-Martins et al.
Journal of Atmospheric and Oceanic Technology, 2014, 31 (4), pp.967-983. ⟨10.1175/JTECH-D-13-00158.1⟩
Journal articles hal-01128443v1

Exploring the uncultured microeukaryote majority in the oceans: reevaluation of ribogroups within stramenopiles

Ramon Massana , Javier Del Campo , Michael E. Sieracki , Stéphane Audic , Ramiro Logares et al.
ISME Journal, 2014, 8 (4), pp.854-866. ⟨10.1038/ismej.2013.204⟩
Journal articles hal-01258217v1
Image document

Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes

Pascal Hingamp , Nigel Grimsley , Silvia G Acinas , Camille Clerissi , Lucie Subirana et al.
ISME Journal, 2013, 7 (9), pp.1678-1695. ⟨10.1038/ismej.2013.59⟩
Journal articles hal-01258223v1
Image document

General Patterns of Diversity in Major Marine Microeukaryote Lineages

Massimo C. Pernice , Ramiro Logares , Laure Guillou , Ramon Massana
PLoS ONE, 2013, 8 (2), pp.e57170. ⟨10.1371/journal.pone.0057170⟩
Journal articles hal-01253995v1