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labStructName_t : Institute of Marine Sciences | Institut de Ciències del Mar [Barcelona]
Document type : Journal articles

Fine-grained sediment dynamics during a strong storm event in the inner-shelf of the Gulf of Lion (NW Mediterranean)

B. Ferré , K. Guizien , Xavier Durrieu de Madron , A. Palanques , J. Guillén , et al.
Continental Shelf Research, 2005, 25, pp.2410-2427
Journal articles hal-00090181v1

The WISE 2000 and 2001 Field Experiments in Support of the SMOS Mission:Sea Surface L-Band Brightness Temperature Observations and Their Application to Sea Surface Salinity Retrieval.

Adriano Camps , Jordi Font , Merce Vall-Llossera , Carolina Gabarró , Ignasi Corbella , et al.
IEEE Transactions on Geoscience and Remote Sensing, 2004, 42 (4), pp.804-823. ⟨10.1109/TGRS.2003.819444⟩
Journal articles hal-00145587v1
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The SMOS mission: new tool for monitoring key elements of the global water cycle

Yann H. Kerr , Philippe Waldteufel , Jean-Pierre Wigneron , Steven Delwart , François Cabot , et al.
Proceedings of the IEEE, 2010, 98 (5), pp.666-687. ⟨10.1109/JPROC.2010.2043032⟩
Journal articles ird-00494925v1
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SMOS : the challenging sea surface salinity measurement from space

Jordi Font , Adriano Camps , Alberto V. Borges , Manuel Martin-Neira , Jacqueline Boutin , et al.
Proceedings of the IEEE, 2010, 98, pp.5. ⟨10.1109/JPROC.2009.2033096⟩
Journal articles ird-00685317v1

Comparison between Eulerian diagnostics and finite-size Lyapunov exponents computed from altimetry in the Algerian basin

Francesco d'Ovidio , Jordi Isern-Fontanet , Cristóbal López , Emilio Hernández-García , Emilio García-Ladona
Deep Sea Research Part I: Oceanographic Research Papers, 2009, 56 (1), pp.15-31. ⟨10.1016/J.DSR.2008.07.014⟩
Journal articles hal-00759988v1

SMOS first data analysis for sea surface salinity determination

Jordi Font , Jacqueline Boutin , Nicolas Reul , Paul Spurgeon , Joaquim Ballabrera-Poy , et al.
International Journal of Remote Sensing, 2013, 34 (9-10), pp.3654-3670. ⟨10.1080/01431161.2012.716541⟩
Journal articles hal-00812747v1

The Bransfield current system

Pablo Sangrà , Carmen Gordo , Mónica Hernández-Arencibia , Angeles Marrero-Díaz , Angel Rodríguez-Santana , et al.
Deep Sea Research Part I: Oceanographic Research Papers, 2011, 58 (4), pp.390-402. ⟨10.1016/j.dsr.2011.01.011⟩
Journal articles istex hal-00838861v1

Surpact: A SMOS Surface Wave Rider for Air-Sea Interaction

Gilles Reverdin , Simon Morisset , Denis Bourras , Nicolas Martin , Antonio Lourenço , et al.
Oceanography, 2013, 26 (1), pp.48-57. ⟨10.5670/oceanog.2013.04⟩
Journal articles hal-00850053v1
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Changes in bacterial community metabolism and composition during the degradation of dissolved organic matter from the jellyfish Aurelia aurita in a Mediterranean coastal lagoon

Marine Blanchet , Olivier Pringault , Marc Bouvy , Philippe Catala , Louise Oriol , et al.
Environmental Science and Pollution Research, 2015, 22 (18), pp.13638-13653. ⟨10.1007/s11356-014-3848-x⟩
Journal articles hal-01103187v1
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Characteristics of colored dissolved organic matter (CDOM) in the Western Arctic Ocean: relationships with microbial activities

Atsushi Matsuoka , Eva Ortega-Retuerta , Annick Bricaud , Kevin R Arrigo , Marcel Babin
Deep Sea Research Part II: Topical Studies in Oceanography, 2015, 118 (Part A), pp.44-52. ⟨10.1016/j.dsr2.2015.02.012⟩
Journal articles hal-01120307v1
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Patterns of Rare and Abundant Marine Microbial Eukaryotes

Ramiro Logares , Stéphane Audic , David Bass , Lucie Bittner , Christophe Boutte , et al.
Current Biology - CB, 2014, 24 (8), pp.813-821. ⟨10.1016/j.cub.2014.02.050⟩
Journal articles hal-01149637v1
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The ocean sampling day consortium

Anna Kopf , Mesude Bicak , Renzo Kottmann , Julia Schnetzer , Ivaylo Kostadinov , et al.
GigaScience, 2015, 4 (1), pp.27. ⟨10.1186/s13742-015-0066-5⟩
Journal articles hal-01174095v1
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Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

Ramon Massana , Angélique Gobet , Stéphane Audic , David Bass , Lucie Bittner , et al.
Environmental Microbiology, 2015, 17 (10), pp.4035-4049. ⟨10.1111/1462-2920.12955⟩
Journal articles hal-01191731v1

Surface Salinity in the North Atlantic Subtropical Gyre During the STRASSE/SPURS Summer 2012 Cruise

Gilles Reverdin , Simon Morisset , Louis Marié , Denis Bourras , Graigory Sutherland , et al.
Limnology and Oceanography, 2015, 28 (1), pp.114-123. ⟨10.5670/oceanog.2015.09⟩
Journal articles hal-01233669v1

Determinants of community structure in the global plankton interactome

Gipsi Lima-Mendez , Karoline Faust , Nicolas Henry , Johan Decelle , Sébastien Colin , et al.
Science, 2015, 348 (6237), pp.1262073. ⟨10.1126/science.1262073⟩
Journal articles hal-01234200v1
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Deep sequencing of amplified Prasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes

Camille Clerissi , Yves Desdevises , Sarah Romac , Stéphane Audic , Colomban de Vargas , et al.
Environmental Microbiology Reports, 2015, 7 (6), pp.979-989. ⟨10.1111/1758-2229.12345⟩
Journal articles hal-01246259v1
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Impacts of ocean acidification in a warming Mediterranean Sea: An overview

Thomas Lacoue-Labarthe , Paulo A.L.D. Nunes , Patrizia Ziveri , Mine Cinar , Frédéric Gazeau , et al.
Regional Studies in Marine Science, 2016, ⟨10.1016/j.rsma.2015.12.005⟩
Journal articles hal-01253944v1
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General Patterns of Diversity in Major Marine Microeukaryote Lineages

Massimo C. Pernice , Ramiro Logares , Laure Guillou , Ramon Massana
PLoS ONE, 2013, 8 (2), pp.e57170. ⟨10.1371/journal.pone.0057170⟩
Journal articles hal-01253995v1
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The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy

Laure Guillou , Dipankar Bachar , Stéphane Audic , David Bass , Cédric Berney , et al.
Nucleic Acids Research, 2013, 41 (D1), pp.D597-D604. ⟨10.1093/nar/gks1160⟩
Journal articles hal-01253994v1
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Open science resources for the discovery and analysis of Tara Oceans data

Stéphane Pesant , Fabrice Not , Marc Picheral , Stefanie Kandels-Lewis , Noan Le Bescot , et al.
Scientific Data , 2015, 2, pp.150023. ⟨10.1038/sdata.2015.23⟩
Journal articles hal-01253984v1

Diversity and distribution of unicellular opisthokonts along the European coast analysed using high-throughput sequencing

Javier Del Campo , Diego Mallo , Ramon Massana , Colomban de Vargas , Thomas A. Richards , et al.
Environmental Microbiology, 2015, 17 (9), pp.3195-3207. ⟨10.1111/1462-2920.12759⟩
Journal articles hal-01258208v1

Molecular diversity and distribution of marine fungi across 130 European environmental samples

Thomas A. Richards , Guy Leonard , Frédéric Mahé , Javier Del Campo , Sarah Romac , et al.
Proceedings of the Royal Society B: Biological Sciences, 2015, 282 (1819), pp.20152243. ⟨10.1098/rspb.2015.2243⟩
Journal articles hal-01258213v1

Exploring the uncultured microeukaryote majority in the oceans: reevaluation of ribogroups within stramenopiles

Ramon Massana , Javier Del Campo , Michael E. Sieracki , Stéphane Audic , Ramiro Logares
ISME Journal, 2014, 8 (4), pp.854-866. ⟨10.1038/ismej.2013.204⟩
Journal articles hal-01258217v1

Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities

Ramiro Logares , Shinichi Sunagawa , Guillem Salazar , Francisco M. Cornejo-Castillo , Isabel Ferrera , et al.
Environmental Microbiology, 2014, 16 (9, SI), pp.2659-2671. ⟨10.1111/1462-2920.12250⟩
Journal articles istex hal-01258219v1

Taming the smallest predators of the oceans

Javier Del Campo , Fabrice Not , Irene Forn , Michael E. Sieracki , Ramon Massana
ISME Journal, 2013, 7 (2), pp.351-358. ⟨10.1038/ismej.2012.85⟩
Journal articles hal-01258224v1

Low Evolutionary Diversification in a Widespread and Abundant Uncultured Protist (MAST-4)

Raquel Rodriguez-Martinez , Gabrielle Rocap , Ramiro Logares , Sarah Romac , Ramon Massana
Molecular Biology and Evolution, 2012, 29 (5), pp.1393-1406. ⟨10.1093/molbev/msr303⟩
Journal articles hal-01258232v1

Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing

Ramiro Logares , Stéphane Audic , Sébastien Santini , Massimo C. Pernice , Colomban de Vargas , et al.
ISME Journal, 2012, 6 (10), pp.1823-1833. ⟨10.1038/ismej.2012.36⟩
Journal articles hal-01258237v1

An original mode of symbiosis in open ocean plankton

Johan Decelle , Ian Probert , Lucie Bittner , Yves Desdevises , Sébastien Colin , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (44), pp.18000-18005. ⟨10.1073/pnas.1212303109⟩
Journal articles hal-01258241v1

Grazing rates and functional diversity of uncultured heterotrophic flagellates

Ramon Massana , Fernando Unrein , Raquel Rodriguez-Martinez , Irene Forn , Thomas Lefort , et al.
ISME Journal, 2009, 3 (5), pp.588-596. ⟨10.1038/ismej.2008.130⟩
Journal articles hal-01258258v1
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Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes

Pascal Hingamp , Nigel Grimsley , Silvia G Acinas , Camille Clerissi , Lucie Subirana , et al.
ISME Journal, 2013, 7 (9), pp.1678-1695. ⟨10.1038/ismej.2013.59⟩
Journal articles hal-01258223v1
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New Insights into the Diversity of Marine Picoeukaryotes

Fabrice Not , Javier Del Campo , Vanessa Balague , Colomban de Vargas , Ramon Massana
PLoS ONE, 2009, 4 (9), pp.e7143. ⟨10.1371/journal.pone.0007143⟩
Journal articles hal-01258270v1
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Sea Surface Salinity Observations with Lagrangian Drifters in the Tropical North Atlantic During SPURS: Circulation, Fluxes, and Comparisons with Remotely Sensed Salinity from Aquarius

Luca R. Centurioni , Verena Hormann , Yi Chao , Gilles Reverdin , Jordi Font , et al.
Oceanography, 2015, 28 (1), pp.96-105. ⟨10.5670/oceanog.2015.08⟩
Journal articles hal-01274715v1
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Plankton networks driving carbon export in the oligotrophic ocean

Lionel Guidi , Samuel Chaffron , Lucie Bittner , Damien Eveillard , Abdelhalim Larhlimi , et al.
Nature, 2016, 532, pp.465-470. ⟨10.1038/nature16942⟩
Journal articles hal-01275276v1
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When riverine dissolved organic matter (DOM) meets labile DOM in coastal waters: changes in bacterial community activity and composition

Marine Blanchet , Olivier Pringault , Christos Panagiotopoulos , Dominique Lefèvre , Bruno Charrìère , et al.
Aquatic Sciences - Research Across Boundaries, 2017, 79 (1), pp.27-43. ⟨10.1007/s00027-016-0477-0⟩
Journal articles hal-01285402v1
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Defining Planktonic Protist Functional Groups on Mechanisms for Energy and Nutrient Acquisition: Incorporation of Diverse Mixotrophic Strategies

Aditee Mitra , Kevin J. Flynn , Urban Tillmann , John A. Raven , David Caron , et al.
Protist, 2016, 167 (2), pp.106-120. ⟨10.1016/j.protis.2016.01.003⟩
Journal articles hal-01285634v1
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Global distribution and vertical patterns of a prymnesiophyte–cyanobacteria obligate symbiosis

Ana M Cabello , Francisco M Cornejo-Castillo , Nicolas Raho , Dolors Blasco , Montserrat Vidal , et al.
ISME Journal, 2016, 10 (3), pp.693-706. ⟨10.1038/ismej.2015.147⟩
Journal articles hal-01289124v1
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Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton

Francisco M. Cornejo-Castillo , Ana M. Cabello , Guillem Salazar , Patricia Sánchez-Baracaldo , Gipsi Lima-Mendez , et al.
Nature Communications, 2016, 7, pp.11071. ⟨10.1038/ncomms11071⟩
Journal articles hal-01295207v1

Macroepibenthic communities at the tip of the Antarctic Peninsula, an ecological survey at different spatial scales.

Julian Gutt , M. C. Alvaro , A. Barco , A. Böhmer , A. Bracher , et al.
Polar Biology, 2016, 39 (5), pp.829-849. ⟨10.1007/s00300-015-1797-6⟩
Journal articles hal-01310185v1
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Delineating ecologically significant taxonomic units from global patterns of marine picocyanobacteria

Gregory K. Farrant , Hugo Doré , Francisco M. Cornejo-Castillo , Frédéric Partensky , Morgane Ratin , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (24), pp.E3365-E3374. ⟨10.1073/pnas.1524865113⟩
Journal articles hal-01331214v1
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Environmental sequencing provides reasonable estimates of the relative abundance of specific picoeukaryotes

Caterina R. Giner , Irene Forn , Sarah Romac , Ramiro Logares , Colomban de Vargas , et al.
Applied and Environmental Microbiology, 2016, 82 (15), pp.4757-4766. ⟨10.1128/AEM.00560-16⟩
Journal articles hal-01332059v1
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Water management practices exacerbate nitrogen retention in Mediterranean catchments

Estela Romero , Josette Garnier , Gilles Billen , Franz Peters , Luis Lassaletta
Science of the Total Environment, 2016, 573, pp.420-432. ⟨10.1016/j.scitotenv.2016.08.007⟩
Journal articles hal-01366666v1

Limited Genetic Connectivity between Gorgonian Morphotypes along a Depth Gradient

Federica Costantini , Andrea Gori , Pablo Lopez-González , Lorenzo Bramanti , Sergio Rossi , et al.
PLoS ONE, 2016, 11 (8), pp.e0160678. ⟨10.1371/journal.pone.0160678⟩
Journal articles hal-01369559v1
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Benthic protists: the under-charted majority

Dominik Forster , Micah Dunthorn , Fréderic Mahé , John R. Dolan , Stéphane Audic , et al.
FEMS Microbiology Ecology, 2016, 92 (8), pp.fiw120. ⟨10.1093/femsec/fiw120⟩
Journal articles hal-01383722v1
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Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses

Simon Roux , Jennifer R. Brum , Bas E. Dutilh , Shinichi Sunagawa , Melissa B. Duhaime , et al.
Nature, 2016, 537 (7622), pp.689-693. ⟨10.1038/nature19366⟩
Journal articles hal-01376822v1
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Accessing the genomic information of unculturable oceanic picoeukaryotes by combining multiple single cells

Jean-François Mangot , Ramiro Logares , Pablo Sánchez , Fran Latorre , Yoann 6 Seeleuthner , et al.
Scientific Reports, 2017, 7, pp.41498. ⟨10.1038/srep41498⟩
Journal articles hal-01466618v1
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Dimethylated sulfur compounds in symbiotic protists: A potentially significant source for marine DMS(P)

Andres Gutierrez-Rodriguez , Loic Pillet , Tristan Biard , Ward Said-Ahmad , Alon Amrani , et al.
Limnology and Oceanography, 2017, 62 (3 ), pp.1139-1154 ⟨10.1002/lno.10491⟩
Journal articles hal-01480231v1

A Lagrangian study tracing water parcel origins in the Canary Upwelling System

Evan Mason , François Colas , Josep L. Pelegrí
Scientia Marina, 2012, 76 (S1), pp.79 - 94. ⟨10.3989/scimar.03608.18D⟩
Journal articles hal-01495951v1

Integrating chytrid fungal parasites into plankton ecology: research gaps and needs

Thijs Frenken , Elisabet Alacid , Stella A. Berger , Elizabeth C. Bourne , Mélanie Gerphagnon , et al.
Environmental Microbiology, 2017, 19 (10), pp.3802 - 3822. ⟨10.1111/1462-2920.13827⟩
Journal articles hal-01624039v1

Soil moisture retrieval from space: the Soil Moisture and Ocean Salinity (SMOS) mission

Yann H. Kerr , Philippe Waldteufel , Jean-Pierre Wigneron , J. Martinuzzi , J. Font , et al.
IEEE Transactions on Geoscience and Remote Sensing, 2001, 39 (8), pp.1729 - 1735. ⟨10.1109/36.942551⟩
Journal articles hal-01655355v1

Patterns and ecological drivers of ocean viral communities

Jennifer Brum , J Cesar Ignacio-Espinoza , Simon Roux , Guilhem Doulcier , Silvia G. Acinas , et al.
Science, 2015, 348 ( 6237), pp.1261498. ⟨10.1126/science.1261498⟩
Journal articles hal-01768331v1