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DNA-DNA hybridization study of Burkholderia species using genomic DNA macro-array analysis coupled to reverse genome probing.

Vincent Ramisse , Jacques Balandreau , François Thibault , Dominique Vidal , Gilles Vergnaud , et al.
International Journal of Systematic and Evolutionary Microbiology, 2003, 53 (Pt 3), pp.739-46. ⟨10.1099/ijs.0.02483-0⟩
Journal articles hal-01158322v1
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Characterization of a tandem repeat polymorphism in Legionella pneumophila and its use for genotyping

Christine Pourcel , Yelena Vidgop , Françoise Ramisse , Gilles Vergnaud , Cuong Tram
Journal of Clinical Microbiology, 2003, 41 (5), pp.1819-26. ⟨10.1128/JCM.41.5.1819-1826.2003⟩
Journal articles hal-01158324v1
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Development of a Multiple-Locus Variable-Number Tandem-Repeat Typing Scheme for Genetic Fingerprinting of Burkholderia cenocepacia and Application to Nationwide Epidemiological Analysis

Christine Segonds , Michelle Thouverez , Antoine Barthe , Nadège Bossuet-Greif , Lenka Tisseyre , et al.
Journal of Clinical Microbiology, 2015, 53 (2), pp.398-409. ⟨10.1128/JCM.02473-14⟩
Journal articles hal-01110749v1

Artificial nucleobase-amino acid conjugates: a new class of TAR RNA binding agents.

Jean-Patrick Joly , Guillaume Mata , Patrick Eldin , Laurence Briant , Fabien Fontaine-Vive , et al.
Chemistry - A European Journal, 2014, 20 (7), pp.2071-9. ⟨10.1002/chem.201303664⟩
Journal articles istex hal-01131870v1

Yersinia pestis genotyping.

Gilles Vergnaud
Emerging Infectious Diseases, 2005, 11 (8), 1317-8; author reply 1318-9
Journal articles hal-01158314v1
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High resolution, on-line identification of strains from the Mycobacterium tuberculosis complex based on tandem repeat typing.

Philippe Le Flèche , Michel Fabre , France Denoeud , Jean-Louis Koeck , Gilles Vergnaud
BMC Microbiology, 2002, 2 (1), pp.37. ⟨10.1186/1471-2180-2-37⟩
Journal articles hal-01158328v1
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A tandem repeats database for bacterial genomes: application to the genotyping of Yersinia pestis and Bacillus anthracis.

Philippe Le Flèche , Yolande Hauck , Lucie Onteniente , Agnès Prieur , France Denoeud , et al.
BMC Microbiology, 2000, 1 (1), pp.2. ⟨10.1186/1471-2180-1-2⟩
Journal articles hal-01158341v1
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Bayesian and Hybrid Cramér–Rao Bounds for the Carrier Recovery Under Dynamic Phase Uncertain Channels

Jianxiao Yang , Benoit Geller , Stéphanie Bay
IEEE Transactions on Signal Processing, 2011, pp.667-680. ⟨10.1109/TSP.2010.2081981⟩
Journal articles hal-01180818v1

Minisatellite polymorphism as a tool to distinguish closely related Lactococcus lactis strains.

Pascal Quénée , Elodie Lepage , Woojin Scott Kim , Gilles Vergnaud , Alexandra Gruss
FEMS Microbiology Letters, 2005, 248 (1), pp.101-9. ⟨10.1016/j.femsle.2005.05.026⟩
Journal articles hal-01158315v1

CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies.

C Pourcel , G Salvignol , Gilles Vergnaud
Microbiology, 2005, 151 (Pt 3), pp.653-63. ⟨10.1099/mic.0.27437-0⟩
Journal articles hal-01158317v1
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Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis

Christine Pourcel , Flore André-Mazeaud , Heinrich Neubauer , Françoise Ramisse , Gilles Vergnaud
BMC Microbiology, 2004, 4 (1), pp.22. ⟨10.1186/1471-2180-4-22⟩
Journal articles hal-01158319v1
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Generation of a CRISPR database for Yersinia pseudotuberculosis complex and role of CRISPR-based immunity in conjugation.

Katja A Koskela , Laura Mattinen , Laura Kalin-Mänttäri , Gilles Vergnaud , Olivier Gorgé , et al.
Environmental Microbiology, 2015, pp.12816. ⟨10.1111/1462-2920.12816⟩
Journal articles istex hal-01152593v1

A nose-only apparatus for airborne delivery of Mycobacterium tuberculosis to mice: calibration of biological parameters.

Céline Louveau , Damien Descroix , Laurence Garnier , Iroudayanadin Delamanche , Pierre Chavarot , et al.
Microbes and Infection, 2005, 7 (3), pp.457-66. ⟨10.1016/j.micinf.2004.11.019⟩
Journal articles istex hal-01158316v1
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High genetic diversity revealed by variable-number tandem repeat genotyping and analysis of hsp65 gene polymorphism in a large collection of "Mycobacterium canettii" strains indicates that the M. tuberculosis complex is a recently emerged clone of "M. canettii".

Michel Fabre , Jean-Louis Koeck , Philippe Le Flèche , Fabrice Simon , Vincent Hervé , et al.
Journal of Clinical Microbiology, 2004, 42 (7), pp.3248-55. ⟨10.1128/JCM.42.7.3248-3255.2004⟩
Journal articles hal-01158318v1

Minisatellites: mutability and genome architecture.

Gilles Vergnaud , France Denoeud
Genome Research, 2000, 10 (7), pp.899-907
Journal articles hal-01159813v1

Molecular Epidemiology of Mycoplasma pneumoniae: Genotyping Using Single Nucleotide Polymorphisms and SNaPshot Technology.

A Touati , Y Blouin , P Sirand-Pugnet , H Renaudin , T Oishi , et al.
Journal of Clinical Microbiology, 2015, 53 (10), pp.3182-94. ⟨10.1128/JCM.01156-15⟩
Journal articles hal-01214201v1
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Staphylococcus aureus from 152 cases of bovine, ovine and caprine mastitis investigated by Multiple-locus variable number of tandem repeat analysis (MLVA)

Dominique Bergonier , Daniel Sobral , Andrea T Fessler , Eric Jacquet , Florence Gilbert , et al.
Veterinary Research, 2014, 45 (1), pp.97. ⟨10.1186/s13567-014-0097-4⟩
Journal articles hal-01123402v1
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Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains: a web-based resource.

France Denoeud , Gilles Vergnaud
BMC Bioinformatics, 2004, 5, pp.4. ⟨10.1186/1471-2105-5-4⟩
Journal articles hal-01158321v1
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Segmental polymorphisms in the proterminal regions of a subset of human chromosomes.

Hera Der-Sarkissian , Gilles Vergnaud , Yves-Marie Borde , Gilles Thomas , José-Arturo Londoño-Vallejo
Genome Research, 2002, 12 (11), pp.1673-8. ⟨10.1101/gr.322802⟩
Journal articles hal-01158329v1

A novel multiple locus variable number of tandem repeat (VNTR) analysis (MLVA) method for Propionibacterium acnes

Yolande Hauck , Charles Soler , Patrick Gérôme , Rithy Vong , Christine Macnab , et al.
Infection, Genetics and Evolution, 2015, 33, pp.233-41. ⟨10.1016/j.meegid.2015.05.009⟩
Journal articles hal-01188389v1

Investigation of a Large Collection of Pseudomonas aeruginosa Bacteriophages Collected from a Single Environmental Source in Abidjan, Côte d'Ivoire.

Christiane Essoh , Libera Latino , Cédric Midoux , Yann Blouin , Guillaume Loukou , et al.
PLoS ONE, 2015, 10 (6), pp.e0130548. ⟨10.1371/journal.pone.0130548⟩
Journal articles hal-01188392v1